Smith Waterman Alignment

Here you can use the Smith-Watermann algorithm to align to amino acid sequences.
We aim to expand the service in the future but as the server we are working on has
a limited capacity we need to restrict the input.

Query
Simply paste your amino acid sequence in this area
characters left.
Database
Simply paste your amino acid sequence in this area
characters left.
Substitution Matrix Select NONE if you want to align nucleotides.